Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB2BRAB2B, member RAS oncogene family. (216 aa)    
Predicted Functional Partners:
RAB14
RAB14, member RAS oncogene family.
   
  0.952
RAB7A
RAB7A, member RAS oncogene family.
   
  0.908
RAB10
RAB10, member RAS oncogene family.
   
  0.879
GORASP2
Golgi reassembly stacking protein 2.
   
 0.879
BLZF1
Basic leucine zipper nuclear factor 1.
    
 0.873
SLC2A4
Solute carrier family 2 member 4.
     
 0.859
ENSCWAP00000019501
annotation not available
    
 0.839
TBC1D1
TBC1 domain family member 1.
    
 0.839
TBC1D4
TBC1 domain family member 4.
    
 0.836
SLC2A1
Solute carrier family 2 member 1.
     
 0.817
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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