Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PNKDPNKD metallo-beta-lactamase domain containing. (385 aa)    
Predicted Functional Partners:
SUOX
Sulfite oxidase.
   
 
 0.917
ENSCWAP00000014850
annotation not available
      
 0.846
GLO1
Glyoxalase I.
  
 0.724
MCEE
methylmalonyl-CoA epimerase.
  
 0.724
GLOD4
Glyoxalase domain containing 4.
  
 0.719
ENSCWAP00000004836
annotation not available
      
 0.718
PARK7
Parkinsonism associated deglycase.
    
 0.707
TMEM25
Transmembrane protein 25.
      
 0.695
ASIC4
Acid sensing ion channel subunit family member 4.
      
 0.692
LDHD
Lactate dehydrogenase D.
    
 0.690
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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