Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF39Rho guanine nucleotide exchange factor 39. (335 aa)    
Predicted Functional Partners:
TIFA
TRAF interacting protein with forkhead associated domain.
    
   0.834
ARHGEF9
Cdc42 guanine nucleotide exchange factor 9.
    
 0.724
ARHGEF37
Rho guanine nucleotide exchange factor 37.
    
 0.705
ARHGEF4
Rho guanine nucleotide exchange factor 4.
    
 0.643
ENSCWAP00000025519
annotation not available
    
 0.643
ITSN2
Intersectin 2.
     
 0.636
ARHGEF6
Rac/Cdc42 guanine nucleotide exchange factor 6.
     
 0.636
MPP3
Membrane palmitoylated protein 3.
      
 0.608
DOLK
Dolichol kinase.
    
 0.593
TIAM2
TIAM Rac1 associated GEF 2.
    
 0.580
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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