STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SREBF1Sterol regulatory element binding transcription factor 1. (1149 aa)    
Predicted Functional Partners:
SCAP
SREBF chaperone.
    
 0.991
EP300
E1A binding protein p300.
    
 0.980
CREBBP
CREB binding protein.
    
 0.974
FBXW7
F-box and WD repeat domain containing 7.
    
 0.972
MED15
Mediator complex subunit 15.
    
 
 0.970
PPARGC1B
PPARG coactivator 1 beta.
    
 0.954
LMNA
Lamin A/C.
    
 
 0.954
LPIN1
Lipin 1.
    
 0.954
FASN
Fatty acid synthase.
   
 0.937
KPNB1
Karyopherin subunit beta 1.
    
 0.936
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.