close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC43Coiled-coil domain containing 43. (227 aa)    
Predicted Functional Partners:
CCDC34
Coiled-coil domain containing 34.
      
 0.528
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
    0.499
GTF2F2
General transcription factor IIF subunit 2.
   
    0.487
CCDC68
Coiled-coil domain containing 68.
      
 0.485
FOXK1
Forkhead box K1.
      
 0.477
TMEM245
Transmembrane protein 245.
      
 0.406
MSH4
mutS homolog 4.
      
 0.405
WASHC3
WASH complex subunit 3.
      
 0.405
ENSCWAP00000021969
annotation not available
      
 0.400
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.