STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPC6Glypican 6. (555 aa)    
Predicted Functional Partners:
SDC1
Syndecan 1.
    
 0.925
FZD2
Frizzled class receptor 2.
     
 0.854
FZD1
Frizzled class receptor 1.
     
 0.854
FZD7
Frizzled class receptor 7.
     
 0.854
FZD10
Frizzled class receptor 10.
     
 0.847
FZD4
Frizzled class receptor 4.
     
 0.847
FZD5
Frizzled class receptor 5.
     
 0.847
FZD9
Frizzled class receptor 9.
     
 0.847
FZD6
Frizzled class receptor 6.
     
 0.847
FZD3
Frizzled class receptor 3.
     
 0.847
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.