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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LY6G5CLymphocyte antigen 6 family member G5C. (144 aa)    
Predicted Functional Partners:
ABHD16A
Abhydrolase domain containing 16A.
      
 0.689
ENSCWAP00000006243
annotation not available
      
 0.686
ENSCWAP00000011301
annotation not available
      
 0.685
C6orf47
Chromosome 6 open reading frame 47.
      
 0.652
GPANK1
G-patch domain and ankyrin repeats 1.
      
 0.629
TRIM40
Tripartite motif containing 40.
      
 0.620
ABT1
Activator of basal transcription 1.
      
 0.616
EFCAB11
EF-hand calcium binding domain 11.
      
 0.598
DEFB124
Defensin beta 124.
      
 0.558
TFAP2D
Transcription factor AP-2 delta.
      
 0.554
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.