Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA46Spermatogenesis associated 46. (247 aa)    
Predicted Functional Partners:
CCER1
Coiled-coil glutamate rich protein 1.
   
    0.983
GAPVD1
GTPase activating protein and VPS9 domains 1.
    
   0.948
SNX24
Sorting nexin 24.
    
   0.943
MDM4
MDM4 regulator of p53.
    
   0.943
HLCS
Holocarboxylase synthetase.
    
   0.918
CSNK1A1
Casein kinase 1 alpha 1.
    
   0.891
SNX22
Sorting nexin 22.
    
   0.860
MGLL
Monoglyceride lipase.
    
   0.791
MDM2
MDM2 proto-oncogene.
    
   0.777
SSMEM1
Serine rich single-pass membrane protein 1.
      
 0.754
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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