STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCKDKBranched chain keto acid dehydrogenase kinase. (412 aa)    
Predicted Functional Partners:
ENSCWAP00000004955
annotation not available
   
 0.964
DBT
Dihydrolipoamide branched chain transacylase E2.
    
 0.902
PDHA1
Pyruvate dehydrogenase E1 alpha 1 subunit.
   
 0.870
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
    
 0.849
PDHB
Pyruvate dehydrogenase E1 beta subunit.
    
 0.830
CETN3
Centrin 3.
    
   0.823
QTRT1
Queuine tRNA-ribosyltransferase catalytic subunit 1.
     
 0.813
SUCLG1
succinate-CoA ligase alpha subunit.
    
 
 0.813
DLD
Dihydrolipoamide dehydrogenase.
    
 0.809
NUDT22
Nudix hydrolase 22.
   
  
 0.798
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.