Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
NEXNNexilin F-actin binding protein. (674 aa)    
Predicted Functional Partners:
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.984
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.977
MAK16
MAK16 homolog.
   
 
 0.976
BRIX1
Biogenesis of ribosomes BRX1.
   
 
 0.970
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
   
 
 0.970
RPF2
Ribosome production factor 2 homolog.
   
 
 0.968
GTPBP4
GTP binding protein 4.
   
 
 0.968
RBM28
RNA binding motif protein 28.
   
 
 0.967
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 
 0.967
RSL1D1
Ribosomal L1 domain containing 1.
   
 
 0.966
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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