Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SIT1Signaling threshold regulating transmembrane adaptor 1. (193 aa)    
Predicted Functional Partners:
KIFAP3
Kinesin associated protein 3.
      
 0.587
ZAP70
Zeta chain of T cell receptor associated protein kinase 70.
   
 
 0.512
XPNPEP1
X-prolyl aminopeptidase 1.
      
 0.458
ENSCWAP00000002462
annotation not available
      
 0.457
TIFA
TRAF interacting protein with forkhead associated domain.
      
 0.457
SLC22A2
Solute carrier family 22 member 2.
      
 0.449
OMD
Osteomodulin.
      
 0.446
PRICKLE3
Prickle planar cell polarity protein 3.
      
 0.442
TRAT1
T cell receptor associated transmembrane adaptor 1.
   
  
 0.440
OPALIN
Oligodendrocytic myelin paranodal and inner loop protein.
      
 0.430
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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