Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRRC9Leucine rich repeat containing 9. (1493 aa)    
Predicted Functional Partners:
NME8
NME/NM23 family member 8.
    
 
 0.776
ENSCWAP00000009050
annotation not available
    
 
 0.751
ENSCWAP00000009118
annotation not available
    
 
 0.751
ENSCWAP00000026214
annotation not available
    
   0.738
DNALI1
Dynein axonemal light intermediate chain 1.
    
 0.689
SMIM31
Small integral membrane protein 31.
      
 0.605
PPP1R11
Protein phosphatase 1 regulatory inhibitor subunit 11.
   
 
 0.585
SLC22A5
Solute carrier family 22 member 5.
      
 0.581
ENSCWAP00000009797
annotation not available
    
 0.577
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
    
 0.577
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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