STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATOH8Atonal bHLH transcription factor 8. (316 aa)    
Predicted Functional Partners:
OLFML1
Olfactomedin like 1.
      
 0.804
COPZ2
Coatomer protein complex subunit zeta 2.
      
 0.754
VGLL3
Vestigial like family member 3.
      
 0.697
MRGPRF
MAS related GPR family member F.
      
 0.694
FKBP10
FKBP prolyl isomerase 10.
      
 0.682
PRRX2
Paired related homeobox 2.
      
 0.669
COL6A2
Collagen type VI alpha 2 chain.
      
 0.645
TIMP2
TIMP metallopeptidase inhibitor 2.
      
 0.644
POSTN
Periostin.
      
 0.639
PRRX1
Paired related homeobox 1.
      
 0.625
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.