STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDK4Pyruvate dehydrogenase kinase 4. (407 aa)    
Predicted Functional Partners:
PDK3
Pyruvate dehydrogenase kinase 3.
    
  0.994
PDK2
Pyruvate dehydrogenase kinase 2.
    
  0.994
PDHB
Pyruvate dehydrogenase E1 beta subunit.
    
 0.987
PDHA1
Pyruvate dehydrogenase E1 alpha 1 subunit.
    
 0.982
PDK1
Pyruvate dehydrogenase kinase 1.
    
  0.935
PDHX
Pyruvate dehydrogenase complex component X.
    
 0.928
DLAT
Dihydrolipoamide S-acetyltransferase.
    
 0.916
DLD
Dihydrolipoamide dehydrogenase.
    
 0.911
SERPINF1
Serpin family F member 1.
      
 0.881
HMGCS2
3-hydroxy-3-methylglutaryl-CoA synthase 2.
     
 0.841
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.