Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPSB2splA/ryanodine receptor domain and SOCS box containing 2. (263 aa)    
Predicted Functional Partners:
CUL5
Cullin 5.
    
 0.984
ELOC
Elongin C.
    
 0.967
NOS2
Nitric oxide synthase 2.
    
 
 0.949
RNF7
Ring finger protein 7.
    
 0.904
ENSCWAP00000014943
annotation not available
    
 0.892
ENSCWAP00000023835
annotation not available
    
 0.892
SKP1
S-phase kinase associated protein 1.
    
 0.876
MYCBP2
MYC binding protein 2.
    
 
 0.818
ARHGEF10
Rho guanine nucleotide exchange factor 10.
    
   0.817
NOS3
Nitric oxide synthase 3.
    
 
 0.804
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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