Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LLGL1LLGL scribble cell polarity complex component 1. (1064 aa)    
Predicted Functional Partners:
LLGL2
LLGL scribble cell polarity complex component 2.
    
  0.994
DLG4
Discs large MAGUK scaffold protein 4.
   
 0.990
PRKCI
Protein kinase C iota.
    
 0.989
ENSCWAP00000016956
annotation not available
    
 0.989
DLG3
Discs large MAGUK scaffold protein 3.
    
 0.970
DLG2
Discs large MAGUK scaffold protein 2.
   
 0.957
DLG1
Discs large MAGUK scaffold protein 1.
   
 0.957
SCRIB
Scribble planar cell polarity protein.
    
 0.948
DLG5
Discs large MAGUK scaffold protein 5.
    
 0.929
PARD6A
Par-6 family cell polarity regulator alpha.
    
 
 0.927
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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