STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PADI1Peptidyl arginine deiminase 1. (663 aa)    
Predicted Functional Partners:
PADI2
Peptidyl arginine deiminase 2.
     
  0.890
PADI3
Peptidyl arginine deiminase 3.
   
 
 0.846
ZBED3
Zinc finger BED-type containing 3.
    
 
 0.690
NLRP5
NLR family pyrin domain containing 5.
   
 
 0.669
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
    
 
 0.600
TES
Testin LIM domain protein.
      
 0.589
GLYATL2
glycine-N-acyltransferase like 2.
      
 0.586
RSL24D1
Ribosomal L24 domain containing 1.
    
 
 0.572
ENSCWAP00000004499
annotation not available
    
 
 0.547
ENSCWAP00000011073
annotation not available
    
 
 0.547
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.