STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TUBTUB bipartite transcription factor. (562 aa)    
Predicted Functional Partners:
TTC21B
Tetratricopeptide repeat domain 21B.
    
 0.925
IFT122
Intraflagellar transport 122.
    
 0.915
WDR19
WD repeat domain 19.
    
 0.908
ENSCWAP00000026552
annotation not available
    
 0.902
ENSCWAP00000028758
annotation not available
    
 0.902
WDR35
WD repeat domain 35.
    
 0.896
IFT43
Intraflagellar transport 43.
    
 
 0.823
GPR161
G protein-coupled receptor 161.
    
 0.776
SIRT1
Sirtuin 1.
    
 
 0.768
ENSCWAP00000015941
annotation not available
    
   0.727
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.