STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARIH1Ariadne RBR E3 ubiquitin protein ligase 1. (556 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
   
 0.991
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.983
RBX1
Ring-box 1.
    
 0.982
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
 0.982
UBB
Ubiquitin B.
    
 0.981
UBE2L6
Ubiquitin conjugating enzyme E2 L6.
    
 0.977
CUL1
Cullin 1.
   
 0.973
ENSCWAP00000025072
annotation not available
    
 0.972
ENSCWAP00000019878
annotation not available
   
 0.967
ENSCWAP00000006692
annotation not available
    
  0.965
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.