STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000006312annotation not available (440 aa)    
Predicted Functional Partners:
SGCA
Sarcoglycan alpha.
    
   0.749
TGDS
TDP-glucose 4,6-dehydratase.
   
  
 0.624
LDLRAD4
Low density lipoprotein receptor class A domain containing 4.
      
 0.597
TMEM161A
Transmembrane protein 161A.
      
 0.589
OR2AT4
Olfactory receptor family 2 subfamily AT member 4.
      
 0.585
TMEM181
Transmembrane protein 181.
      
 0.583
GPR176
G protein-coupled receptor 176.
      
 0.569
USP9X
Ubiquitin specific peptidase 9 X-linked.
      
 0.509
SGCE
Sarcoglycan epsilon.
    
   0.487
NEK3
NIMA related kinase 3.
      
 0.481
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.