STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11orf65Chromosome 11 open reading frame 65. (313 aa)    
Predicted Functional Partners:
POGLUT3
Protein O-glucosyltransferase 3.
      
 0.588
NPAT
Nuclear protein, coactivator of histone transcription.
      
 0.541
UBE2T
Ubiquitin conjugating enzyme E2 T.
    
   0.524
CPA6
Carboxypeptidase A6.
      
 0.494
CCDC148
Coiled-coil domain containing 148.
      
 0.469
NAA16
N(alpha)-acetyltransferase 16, NatA auxiliary subunit.
      
 0.452
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.