STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM19Transmembrane protein 19. (336 aa)    
Predicted Functional Partners:
RUNDC3A
RUN domain containing 3A.
      
 0.785
LIPN
Lipase family member N.
      
 0.764
ENSCWAP00000018013
annotation not available
      
 0.636
ENSCWAP00000028609
annotation not available
      
 0.630
LCLAT1
Lysocardiolipin acyltransferase 1.
  
 
  0.610
RMDN1
Regulator of microtubule dynamics 1.
  
 
  0.610
RMDN2
Regulator of microtubule dynamics 2.
  
 
  0.610
RMDN3
Regulator of microtubule dynamics 3.
  
 
  0.610
LPCAT1
Lysophosphatidylcholine acyltransferase 1.
    
  0.608
AGPAT2
1-acylglycerol-3-phosphate O-acyltransferase 2.
    
  0.608
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.