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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOBEC2Apolipoprotein B mRNA editing enzyme catalytic subunit 2. (224 aa)    
Predicted Functional Partners:
APOBEC4
Apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4.
     
 0.912
A1CF
APOBEC1 complementation factor.
     
 0.841
SRP19
Signal recognition particle 19.
      
 0.750
MYL1
Myosin light chain 1.
   
  
 0.739
TDG
Thymine DNA glycosylase.
      
 0.692
RBM47
RNA binding motif protein 47.
     
 0.685
APOB
Apolipoprotein B.
      
 0.673
APOBEC1
Apolipoprotein B mRNA editing enzyme catalytic subunit 1.
    
0.668
UNC45B
Unc-45 myosin chaperone B.
   
  
 0.667
ENSCWAP00000020400
annotation not available
     
0.663
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.