ENSCWAP00000006339 protein (Catagonus wagneri)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSCWAP00000006339

annotation not available (886 aa)

Predicted Functional Partners:

RAP1A

0.991

MRAS

0.987

NRAS

0.985

ENSCWAP00000005082

0.984

ENSCWAP00000027499

0.984

RRAS

0.982

HRAS

0.980

RALA

0.974

RALB

0.974

ENSCWAP00000023736

0.969

Your Current Organism:

Catagonus wagneri

NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCWAP00000005082	ENSCWAP00000006339	ENSCWAP00000005082	ENSCWAP00000006339	annotation not available	annotation not available	0.984
ENSCWAP00000005082	ENSCWAP00000023736	ENSCWAP00000005082	ENSCWAP00000023736	annotation not available	annotation not available	0.678
ENSCWAP00000005082	HRAS	ENSCWAP00000005082	ENSCWAP00000008457	annotation not available	HRas proto-oncogene, GTPase.	0.522
ENSCWAP00000005082	NRAS	ENSCWAP00000005082	ENSCWAP00000003281	annotation not available	NRAS proto-oncogene, GTPase.	0.522
ENSCWAP00000005082	RALA	ENSCWAP00000005082	ENSCWAP00000009355	annotation not available	RAS like proto-oncogene A.	0.539
ENSCWAP00000005082	RALB	ENSCWAP00000005082	ENSCWAP00000028304	annotation not available	RAS like proto-oncogene B.	0.539
ENSCWAP00000005082	RAP1A	ENSCWAP00000005082	ENSCWAP00000000066	annotation not available	RAP1A, member of RAS oncogene family.	0.859
ENSCWAP00000006339	ENSCWAP00000005082	ENSCWAP00000006339	ENSCWAP00000005082	annotation not available	annotation not available	0.984
ENSCWAP00000006339	ENSCWAP00000023736	ENSCWAP00000006339	ENSCWAP00000023736	annotation not available	annotation not available	0.969
ENSCWAP00000006339	ENSCWAP00000027499	ENSCWAP00000006339	ENSCWAP00000027499	annotation not available	annotation not available	0.984
ENSCWAP00000006339	HRAS	ENSCWAP00000006339	ENSCWAP00000008457	annotation not available	HRas proto-oncogene, GTPase.	0.980
ENSCWAP00000006339	MRAS	ENSCWAP00000006339	ENSCWAP00000016441	annotation not available	Muscle RAS oncogene homolog.	0.987
ENSCWAP00000006339	NRAS	ENSCWAP00000006339	ENSCWAP00000003281	annotation not available	NRAS proto-oncogene, GTPase.	0.985
ENSCWAP00000006339	RALA	ENSCWAP00000006339	ENSCWAP00000009355	annotation not available	RAS like proto-oncogene A.	0.974
ENSCWAP00000006339	RALB	ENSCWAP00000006339	ENSCWAP00000028304	annotation not available	RAS like proto-oncogene B.	0.974
ENSCWAP00000006339	RAP1A	ENSCWAP00000006339	ENSCWAP00000000066	annotation not available	RAP1A, member of RAS oncogene family.	0.991
ENSCWAP00000006339	RRAS	ENSCWAP00000006339	ENSCWAP00000008461	annotation not available	RAS related.	0.982
ENSCWAP00000023736	ENSCWAP00000005082	ENSCWAP00000023736	ENSCWAP00000005082	annotation not available	annotation not available	0.678
ENSCWAP00000023736	ENSCWAP00000006339	ENSCWAP00000023736	ENSCWAP00000006339	annotation not available	annotation not available	0.969
ENSCWAP00000023736	ENSCWAP00000027499	ENSCWAP00000023736	ENSCWAP00000027499	annotation not available	annotation not available	0.522