Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPANK1G-patch domain and ankyrin repeats 1. (349 aa)    
Predicted Functional Partners:
PRRC2A
Proline rich coiled-coil 2A.
      
 0.693
VWA7
Von Willebrand factor A domain containing 7.
      
 0.665
PPP1R18
Protein phosphatase 1 regulatory subunit 18.
      
 0.665
PRKRIP1
PRKR interacting protein 1.
   
  
 0.617
C6orf47
Chromosome 6 open reading frame 47.
      
 0.605
SFXN5
Sideroflexin 5.
      
 0.585
CXorf56
Chromosome X open reading frame 56.
      
 0.582
SDE2
SDE2 telomere maintenance homolog.
      
 0.581
FAM50A
Family with sequence similarity 50 member A.
      
 0.578
FAM110A
Family with sequence similarity 110 member A.
      
 0.561
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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