Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C6orf47Chromosome 6 open reading frame 47. (297 aa)    
Predicted Functional Partners:
NCR3
Natural cytotoxicity triggering receptor 3.
      
 0.650
GPANK1
G-patch domain and ankyrin repeats 1.
      
 0.605
BAG6
BCL2 associated athanogene 6.
      
 0.583
LY6G5C
Lymphocyte antigen 6 family member G5C.
      
 0.570
ENSCWAP00000006243
annotation not available
      
 0.494
ABHD16A
Abhydrolase domain containing 16A.
      
 0.488
TCF19
Transcription factor 19.
      
 0.487
TFAP2D
Transcription factor AP-2 delta.
      
 0.469
SDF4
Stromal cell derived factor 4.
      
 0.454
FAM163A
Family with sequence similarity 163 member A.
      
 0.454
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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