STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIPAL3NIPA like domain containing 3. (411 aa)    
Predicted Functional Partners:
FAM131C
Family with sequence similarity 131 member C.
      
 0.761
ZBTB40
Zinc finger and BTB domain containing 40.
      
 0.753
MAN1C1
Mannosidase alpha class 1C member 1.
      
 0.751
ENSCWAP00000028087
annotation not available
      
 0.689
SPRYD7
SPRY domain containing 7.
      
 0.674
HSDL1
Hydroxysteroid dehydrogenase like 1.
      
 0.674
PDZD3
PDZ domain containing 3.
      
 0.659
SLC35A4
Solute carrier family 35 member A4.
      
 0.652
SERAC1
Serine active site containing 1.
      
 0.642
POLR2G
RNA polymerase II subunit G.
      
 0.613
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.