Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000006378annotation not available (405 aa)    
Predicted Functional Partners:
SUMO1
Small ubiquitin like modifier 1.
    
 0.926
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.904
ENSCWAP00000027558
annotation not available
    
 0.891
RANBP2
RAN binding protein 2.
    
 0.827
RUBCNL
Rubicon like autophagy enhancer.
   
   0.826
C1orf109
Chromosome 1 open reading frame 109.
   
    0.818
CBX5
Chromobox 5.
    
 0.816
CWC25
CWC25 spliceosome associated protein homolog.
   
   0.815
PML
Promyelocytic leukemia.
   
 
 0.814
LIX1
Limb and CNS expressed 1.
   
    0.814
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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