Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPBAR1G protein-coupled bile acid receptor 1. (329 aa)    
Predicted Functional Partners:
ARPC3
Actin related protein 2/3 complex subunit 3.
   
 0.992
ENSCWAP00000028898
annotation not available
   
 0.990
ACTR2
Actin related protein 2.
   
 0.986
ENSCWAP00000005473
annotation not available
   
 0.963
ACTR3
Actin related protein 3.
   
 0.963
ARPC5L
Actin related protein 2/3 complex subunit 5 like.
   
 0.961
ARPC5
Actin related protein 2/3 complex subunit 5.
   
 0.961
ARPC1A
Actin related protein 2/3 complex subunit 1A.
   
 0.950
ARPC1B
Actin related protein 2/3 complex subunit 1B.
   
 0.950
CAPZB
Capping actin protein of muscle Z-line subunit beta.
   
 
 0.945
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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