STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000006392annotation not available (166 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.768
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.751
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
    
 
 0.700
KIF5A
Kinesin family member 5A.
    
 0.686
KIF5B
Kinesin family member 5B.
    
 0.686
LYPD6
LY6/PLAUR domain containing 6.
    
 0.686
LYPD6B
LY6/PLAUR domain containing 6B.
    
 0.686
KIF5C
Kinesin family member 5C.
    
 0.686
TEP1
Telomerase associated protein 1.
    
 0.673
NME8
NME/NM23 family member 8.
   
  0.651
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.