Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRDM10PR/SET domain 10. (1157 aa)    
Predicted Functional Partners:
SORBS3
Sorbin and SH3 domain containing 3.
    
 
 0.684
POLR3B
RNA polymerase III subunit B.
    
 0.676
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.629
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
    
 
 0.616
ZNHIT2
Zinc finger HIT-type containing 2.
    
 
 0.610
ENTHD1
ENTH domain containing 1.
    
 
 0.601
KATNA1
Katanin catalytic subunit A1.
    
 
 0.586
KATNAL1
Katanin catalytic subunit A1 like 1.
    
 
 0.586
ASPHD1
Aspartate beta-hydroxylase domain containing 1.
      
 0.567
B3GALT2
Beta-1,3-galactosyltransferase 2.
      
 0.566
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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