Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
DPYDDihydropyrimidine dehydrogenase. (1025 aa)    
Predicted Functional Partners:
UMPS
Uridine monophosphate synthetase.
  
 0.992
DPYS
Dihydropyrimidinase.
  
 0.982
DPYSL2
Dihydropyrimidinase like 2.
  
 0.974
UPB1
Beta-ureidopropionase 1.
  
 0.967
DPYSL5
Dihydropyrimidinase like 5.
  
 0.957
DPYSL3
Dihydropyrimidinase like 3.
  
 0.957
CYB5R4
Cytochrome b5 reductase 4.
  
 0.950
UPP2
Uridine phosphorylase 2.
    
 0.947
OXNAD1
Oxidoreductase NAD binding domain containing 1.
  
 0.943
UPP1
Uridine phosphorylase 1.
    
 0.941
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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