Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APOMApolipoprotein M. (188 aa)    
Predicted Functional Partners:
APOA2
Apolipoprotein A2.
   
 
 0.868
APOC3
Apolipoprotein C3.
   
 
 0.758
APOC2
Apolipoprotein C2.
   
 
 0.751
APOB
Apolipoprotein B.
   
 
 0.742
SPP2
Secreted phosphoprotein 2.
   
  
 0.673
ENSCWAP00000008227
annotation not available
   
 
 0.657
APOA4
Apolipoprotein A4.
     
 0.645
APOE
Apolipoprotein E.
     
 0.639
APOA1
Apolipoprotein A1.
   
 
 0.625
TPRG1
Tumor protein p63 regulated 1.
      
 0.591
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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