STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRFN2Leucine rich repeat and fibronectin type III domain containing 2. (791 aa)    
Predicted Functional Partners:
DLG4
Discs large MAGUK scaffold protein 4.
   
 0.986
DLG3
Discs large MAGUK scaffold protein 3.
    
 0.956
DLG2
Discs large MAGUK scaffold protein 2.
    
 0.903
DLG1
Discs large MAGUK scaffold protein 1.
    
 0.903
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
   
 0.752
GP9
Glycoprotein IX platelet.
   
 0.740
GP1BB
Glycoprotein Ib platelet subunit beta.
   
 0.722
ENSCWAP00000001830
annotation not available
   
  0.717
GRIN2C
Glutamate ionotropic receptor NMDA type subunit 2C.
   
 0.706
ENSCWAP00000021365
annotation not available
   
 0.704
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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