STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TNIP1TNFAIP3 interacting protein 1. (634 aa)    
Predicted Functional Partners:
TNFAIP3
TNF alpha induced protein 3.
   
 0.997
NFKB1
Nuclear factor kappa B subunit 1.
   
 
 0.975
TNF
Tumor necrosis factor.
    
 
 0.957
TNFRSF1A
TNF receptor superfamily member 1A.
    
 
 0.952
UBB
Ubiquitin B.
    
   0.924
TBK1
TANK binding kinase 1.
   
 
 0.912
TAX1BP1
Tax1 binding protein 1.
    
 
 0.909
NFKB2
Nuclear factor kappa B subunit 2.
   
 
 0.907
RB1CC1
RB1 inducible coiled-coil 1.
    
   0.892
MYD88
MYD88 innate immune signal transduction adaptor.
    
 
 0.869
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.