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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM131BFamily with sequence similarity 131 member B. (359 aa)    
Predicted Functional Partners:
SLU7
SLU7 homolog, splicing factor.
      
 0.751
ZMAT2
Zinc finger matrin-type 2.
      
 0.733
RBM10
RNA binding motif protein 10.
      
 0.648
ENSCWAP00000018920
annotation not available
     
 0.634
CWC22
CWC22 spliceosome associated protein homolog.
      
 0.626
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
      
 0.625
CEP55
Centrosomal protein 55.
      
 0.624
ENSCWAP00000019195
annotation not available
      
 0.619
CLCN6
Chloride voltage-gated channel 6.
     
 0.608
AVPR1B
Arginine vasopressin receptor 1B.
   
  
 0.576
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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