Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM131BFamily with sequence similarity 131 member B. (359 aa)    
Predicted Functional Partners:
CLCN6
Chloride voltage-gated channel 6.
     
 0.729
ENSCWAP00000018920
annotation not available
     
 0.728
ZMAT2
Zinc finger matrin-type 2.
      
 0.675
SLC17A7
Solute carrier family 17 member 7.
   
  
 0.599
GDF11
Growth differentiation factor 11.
      
 0.589
RBM10
RNA binding motif protein 10.
     
 0.588
SLU7
SLU7 homolog, splicing factor.
      
 0.586
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
      
 0.584
RNF130
Ring finger protein 130.
      
 0.578
CCDC85A
Coiled-coil domain containing 85A.
      
 0.577
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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