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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLRC3NLR family CARD domain containing 3. (1113 aa)    
Predicted Functional Partners:
ZDHHC1
Zinc finger DHHC-type containing 1.
      
 0.760
RIPK2
Receptor interacting serine/threonine kinase 2.
   
 0.728
PYCARD
PYD and CARD domain containing.
   
 0.722
RNF5
Ring finger protein 5.
      
 0.711
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.695
TRAF6
TNF receptor associated factor 6.
   
 0.688
UBB
Ubiquitin B.
    
  0.667
TRIM56
Tripartite motif containing 56.
    
 0.667
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.663
TBK1
TANK binding kinase 1.
   
 0.661
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.