Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCARF2Scavenger receptor class F member 2. (903 aa)    
Predicted Functional Partners:
TNFRSF13C
TNF receptor superfamily member 13C.
    
 0.617
SLC7A4
Solute carrier family 7 member 4.
    
 0.611
HSPG2
Heparan sulfate proteoglycan 2.
  
 
  0.606
DGCR2
DiGeorge syndrome critical region gene 2.
    
 0.603
THAP7
THAP domain containing 7.
      
 0.585
ENSCWAP00000006472
annotation not available
      
 0.565
AIFM3
Apoptosis inducing factor mitochondria associated 3.
      
 0.560
PI4KA
Phosphatidylinositol 4-kinase alpha.
      
 0.557
TNFRSF13B
TNF receptor superfamily member 13B.
    
 0.546
TNFRSF17
TNF receptor superfamily member 17.
    
 0.543
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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