Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBP7Retinol binding protein 7. (134 aa)    
Predicted Functional Partners:
RBP4
Retinol binding protein 4.
     
 0.599
RTL4
Retrotransposon Gag like 4.
      
 0.585
ENSCWAP00000028357
annotation not available
      
 0.583
UBE4B
Ubiquitination factor E4B.
      
 0.552
ATOH8
Atonal bHLH transcription factor 8.
      
 0.520
ENSCWAP00000010819
annotation not available
   
 
 0.513
TTR
Transthyretin.
   
 
 0.513
LRAT
Lecithin retinol acyltransferase.
     
 0.503
NHLRC2
NHL repeat containing 2.
      
 0.499
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
      
 0.497
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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