STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PADI4Peptidyl arginine deiminase 4. (666 aa)    
Predicted Functional Partners:
NLRP5
NLR family pyrin domain containing 5.
   
 
 0.888
ZBED3
Zinc finger BED-type containing 3.
    
 
 0.887
PADI3
Peptidyl arginine deiminase 3.
     
  0.815
PADI2
Peptidyl arginine deiminase 2.
     
  0.802
SFN
Stratifin.
    
 
 0.778
RSL24D1
Ribosomal L24 domain containing 1.
    
 
 0.766
SKP1
S-phase kinase associated protein 1.
    
   0.740
ENSCWAP00000004499
annotation not available
    
 
 0.721
ENSCWAP00000011073
annotation not available
    
 
 0.721
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
    
 
 0.600
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.