Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HTRA4HtrA serine peptidase 4. (480 aa)    
Predicted Functional Partners:
XIAP
X-linked inhibitor of apoptosis.
    
 0.971
PINK1
PTEN induced kinase 1.
    
 0.951
BIRC5
Baculoviral IAP repeat containing 5.
    
 0.884
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.870
MAPT
Microtubule associated protein tau.
    
   0.859
GCM1
Glial cells missing transcription factor 1.
    
 
 0.850
BIRC2
Baculoviral IAP repeat containing 2.
    
 0.832
BIRC3
Baculoviral IAP repeat containing 3.
    
 0.832
BIRC7
Baculoviral IAP repeat containing 7.
    
 0.832
ARMC8
Armadillo repeat containing 8.
    
 
 0.811
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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