STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDSS2Decaprenyl diphosphate synthase subunit 2. (394 aa)    
Predicted Functional Partners:
PDSS1
Decaprenyl diphosphate synthase subunit 1.
  
 
0.997
COQ2
Coenzyme Q2, polyprenyltransferase.
  
 
 0.984
GGPS1
Geranylgeranyl diphosphate synthase 1.
     
 0.964
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.961
DHDDS
Dehydrodolichyl diphosphate synthase subunit.
  
 
 0.957
NUS1
NUS1 dehydrodolichyl diphosphate synthase subunit.
  
 
 0.943
COQ3
Coenzyme Q3, methyltransferase.
  
 0.934
COQ5
Coenzyme Q5, methyltransferase.
   
 0.931
FNTA
Farnesyltransferase, CAAX box, alpha.
     
 0.929
FDPS
Farnesyl diphosphate synthase.
    
 0.929
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.