Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TIAM2TIAM Rac1 associated GEF 2. (1694 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
    
 0.938
PARD3
Par-3 family cell polarity regulator.
    
 0.937
RAC1
Rac family small GTPase 1.
    
 0.901
RAC2
Rac family small GTPase 2.
    
 0.901
RAC3
Rac family small GTPase 3.
    
 0.901
CD44
CD44 molecule (Indian blood group).
    
 0.896
PRKCI
Protein kinase C iota.
    
 0.895
ENSCWAP00000016956
annotation not available
    
 0.895
PARD3B
Par-3 family cell polarity regulator beta.
    
 0.883
PAK1
P21 (RAC1) activated kinase 1.
    
 0.877
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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