STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIGD1BHIG1 hypoxia inducible domain family member 1B. (99 aa)    
Predicted Functional Partners:
COX5B
Cytochrome c oxidase subunit 5B.
   
 0.814
C1orf198
Chromosome 1 open reading frame 198.
   
 0.805
ENSCWAP00000004492
annotation not available
   
 0.788
COX6A2
Cytochrome c oxidase subunit 6A2.
   
 0.788
ENSCWAP00000018239
annotation not available
   
 0.788
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.783
COX6B1
Cytochrome c oxidase subunit 6B1.
   
 0.763
TRIR
Telomerase RNA component interacting RNase.
   
 0.763
COX6B2
Cytochrome c oxidase subunit 6B2.
   
 0.763
COX4I2
Cytochrome c oxidase subunit 4I2.
   
 0.760
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.