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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUSFUS RNA binding protein. (518 aa)    
Predicted Functional Partners:
TNPO1
Transportin 1.
    
 
 0.976
TARDBP
TAR DNA binding protein.
   
 0.975
SNRNP70
Small nuclear ribonucleoprotein U1 subunit 70.
   
 0.948
C9orf72
C9orf72-SMCR8 complex subunit.
    
 
 0.920
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.897
PRMT1
Protein arginine methyltransferase 1.
   
 
 0.890
ENSCWAP00000007523
annotation not available
   
 0.879
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
0.873
ENSCWAP00000010327
annotation not available
   
 0.869
TIA1
TIA1 cytotoxic granule associated RNA binding protein.
   
 0.855
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.