STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RUFY4RUN and FYVE domain containing 4. (569 aa)    
Predicted Functional Partners:
TRAPPC9
Trafficking protein particle complex 9.
    
   0.923
TRAPPC1
Trafficking protein particle complex 1.
    
   0.866
NDC80
NDC80 kinetochore complex component.
    
   0.846
TRAPPC5
Trafficking protein particle complex 5.
    
   0.845
RAB7A
RAB7A, member RAS oncogene family.
    
  0.842
RAB7B
RAB7B, member RAS oncogene family.
     
 0.836
FYCO1
FYVE and coiled-coil domain containing 1.
     
  0.835
TRAPPC2L
Trafficking protein particle complex 2 like.
    
   0.827
MAP11
Microtubule associated protein 11.
    
 
 0.808
TRAPPC6B
Trafficking protein particle complex 6B.
    
   0.780
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.