STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C5General transcription factor IIIC subunit 5. (518 aa)    
Predicted Functional Partners:
GTF3C4
General transcription factor IIIC subunit 4.
   
 0.999
GTF3C3
General transcription factor IIIC subunit 3.
   
 0.999
GTF3C2
General transcription factor IIIC subunit 2.
   
 0.999
GTF3C1
General transcription factor IIIC subunit 1.
   
 0.999
GTF3C6
General transcription factor IIIC subunit 6.
   
 0.998
ENSCWAP00000002066
annotation not available
    
 0.984
BRF1
BRF1 RNA polymerase III transcription initiation factor subunit.
    
 0.951
PBRM1
Polybromo 1.
    
   0.946
ZNF512B
Zinc finger protein 512B.
   
 0.939
ZNF512
Zinc finger protein 512.
   
 0.939
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.