Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PABPC1Lpoly(A) binding protein cytoplasmic 1 like. (610 aa)    
Predicted Functional Partners:
PABPN1
poly(A) binding protein nuclear 1.
   
 0.955
PABPC5
poly(A) binding protein cytoplasmic 5.
   
 0.936
EIF4A1
Eukaryotic translation initiation factor 4A1.
   
 0.930
UPF1
UPF1 RNA helicase and ATPase.
   
 0.925
PAIP1
poly(A) binding protein interacting protein 1.
   
 0.923
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
   
 0.921
EIF4A2
Eukaryotic translation initiation factor 4A2.
   
 0.920
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
   
 0.914
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.903
PAN3
poly(A) specific ribonuclease subunit PAN3.
    
 0.902
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.