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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TM9SF2Transmembrane 9 superfamily member 2. (663 aa)    
Predicted Functional Partners:
TMED10
Transmembrane p24 trafficking protein 10.
   
  
 0.884
CABCOCO1
Ciliary associated calcium binding coiled-coil 1.
   
    0.867
SLC35A2
Solute carrier family 35 member A2.
      
 0.856
VPS54
VPS54 subunit of GARP complex.
      
 0.755
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
   
  
 0.746
UGP2
UDP-glucose pyrophosphorylase 2.
      
 0.745
GLG1
Golgi glycoprotein 1.
   
  
 0.691
HVCN1
Hydrogen voltage gated channel 1.
      
 0.679
SPTLC2
Serine palmitoyltransferase long chain base subunit 2.
   
  
 0.675
SPTSSA
Serine palmitoyltransferase small subunit A.
      
 0.671
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.