Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000006582annotation not available (79 aa)    
Predicted Functional Partners:
UBB
Ubiquitin B.
    
  0.907
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
 0.889
DCAF11
DDB1 and CUL4 associated factor 11.
    
 
 0.870
DCAF16
DDB1 and CUL4 associated factor 16.
      
 0.868
RNF166
Ring finger protein 166.
    
   0.852
TIPARP
TCDD inducible poly(ADP-ribose) polymerase.
    
   0.836
RNF4
Ring finger protein 4.
   
 
 0.819
FEM1B
Fem-1 homolog B.
    
 
 0.816
TNFAIP3
TNF alpha induced protein 3.
    
 
 0.764
TNKS
Tankyrase.
    
   0.742
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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